Roles
Director of Science and Head of the Department of Research and Collections
Head of Delegation of GBIF Norway; Vice-Chair GBIF Science Committee
Chair of the Board of the Norwegian Scientific Committee for Food and Environment (VKM); Chair of the Panel on CITES, Norwegian Scientific Committee for Food and Environment (VKM); Head of CITES Scientific Authority of Norway;
Member of the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) Plants Committee
Member of the Evolution, eDNA, Genomics and Ethnobotany (EDGE) research group
Elected member of the Norwegian Academy of Science and Letters
Research
Plant identification using molecular barcoding has a huge potential for biodiversity, conservation, and monitoring of trade in plant genetic resources for pharmaceutical manufacturing, horticulture and tropical timber trade. DNA barcoding as a method has been embraced in science, especially for identification of animals and fungi. In recent years, researchers have successfully shown the power and accuracy of DNA barcoding by creating molecular identification systems for various purposes, such as the identification of cryptic species, species adulteration in marine food products, tracing illegal ivory trade, and assessing tropical forest diversity.
Plant barcoding has lagged in absence of a suitable single identification marker, and quality trade-offs of the various other proposed markers. Furthermore, accurate species identification requires a clear definition of intraspecific variation versus interspecific variation, which is also known as the barcoding gap. The presence or absence of a barcoding gap has been disputed, but ultimately a practical approach needs to be adopted to enable widespread use of plant DNA barcoding. Previous research has focused on the use of two or more molecular markers for DNA barcoding, but the advent of high throughput sequencing allows a genomic approach to DNA barcoding using full chloroplast genomes. In addition, target-enrichment methods allow amplification of genetic data from degraded material, such as herbarium collections, traded and processed material and forensic traces, which in turn reduces the need to rely on short molecular markers.
Research in my group focuses on:
- Molecular identification of processed plant products in trade, specifically of medicinal plant species susceptible to adulteration, overharvested and endangered taxa, and monitoring of cross-border trade in CITES-listed species.
- Combining chloroplast genome data and de novo next-gen generated chloroplast genomes, to make more accurate analysis of intra and interspecific genetic variation, with the specific aim of automated species identification
- Development of specific target-enrichment methods for efficient generation of genetic data from degraded material, such as herbarium collections, and traded and processed material.
These technological and methodological advances may help unlock the huge potential for accurate plant identification using molecular tools to support vital public policies and tasks, such as conserving biodiversity, monitoring trade in plant genetic resources for pharmaceutical manufacturing, horticulture and tropical timber industries, and the enforcement of the CBD Nagoya protocol on Access and Benefit Sharing.
Supervised PhD students
Tsedal Asres Wendmu. 2024. Biocultural diversity of sorghum in Tigray, Northern Ethiopia. Philosophiae Doctor (PhD) Thesis 2024:67. Norwegian University of Life Sciences. Main supervisor: Ola Westengen; Co-supervisors: Hugo de Boer, Fetien Abay. Defense.
Cintia Oliveira Carvalho. 2024. Tracing Hidden Diversity – Environmental DNA as a tool for detecting aquatic life. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Research and Collections, Natural History Museum, University of Oslo. Main supervisor: Hugo de Boer; Co-supervisors: Jonathan Ready, Quentin Mauvisseau. Defense. Current position.
Anna Karolina Oliveira de Queiroz. 2024. Dietary metabarcoding applied to fisheries management in the southwest Atlantic. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Research and Collections, Natural History Museum, University of Oslo. Main supervisor: Hugo de Boer; Co-supervisors: Jonathan Ready, Quentin Mauvisseau. Defense. Current position.
Felicitas Mareike Mück. 2024. Novel integrative approaches to examine the authenticity and quality of herbal medicines with a focus on two Traditional Chinese Medicine formulae applied in women's healthcare. Dissertation for the degree of Philoshiae Doctor (PhD). Section for Pharmaceutical Chemistry, Department of Pharmacy, The Faculty of Mathematics and Natural Sciences, University of Oslo. Main supervisor Helle Wangensteen; Co-supervisors Hugo de Boer, Kristin Odlo Høye. Defense. Current position.
Hussein Shakeel Butt. 2024. Characterization of novel polysaccharides and polyphenols in selected Nordic medicinal plants identified through historical sources. Dissertation for the degree of Philoshiae Doctor (PhD). Section for Pharmaceutical Chemistry, Department of Pharmacy, The Faculty of Mathematics and Natural Sciences, University of Oslo. Main supervisor Kari Tvete Inngjerdingen; Co-supervisors Hugo de Boer, Ane Ohrvik. Dissertation. Current position.
Anne-Sophie Quatela. 2023. Bridging the past to the present: investigating species boundaries with herbarium specimens and next-generation-sequencing. A case study of circumpolar Silene sect. Physolychnis. Doctor of Philosophy. Department of Biological and Environmental Sciences. University of Gothenburg. Main supervisor: Bengt Oxelman; Co-supervisors Hugo de Boer, Christine Bacon. Dissertation. Current position.
Ntwae Moiloa. 2023. Phylogenetic Relationships, Biogeography and Species Delimitation: A case study on southern African Silene (Caryophyllaceae). Doctor of Philosophy. Department of Biological and Environmental Sciences. University of Gothenburg. Main supervisor: Bengt Oxelman; Co-supervisors Hugo de Boer, Christine Bacon. Dissertation. Current position.
Margret Veltman. 2023. Hitting a moving target: Novel genomic resources to identify and trace traded orchids. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Research and Collections, Natural History Museum, University of Oslo. Main supervisor: Hugo de Boer; Co-supervisors: Barbara Gravendeel, Mike Fay, Alexandre Antonelli. Dissertation. Current position.
María de los Ángeles Ariza Salazar. 2023. Plant diversity assessments through soil eDNA metabarcoding. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Research and Collections, Natural History Museum, University of Oslo. Main supervisor: Hugo de Boer; Co-supervisors Bengt Oxelman, Inger Greve Alsos. Dissertation. Current position.
Siri Abihudi. 2022. Ethnobotanical use, threat status and optimalenvironmental germination conditions for conservation of aloe species in Tanzania. Dissertation for the Degree of Doctor of Philosophy in Life Sciences of the Nelson Mandela African Institution of Science and Technology, Arusha, Tanzania. Main supervisor: Anna Treydte; Co-supervisors: Hugo de Boer, RLA Mahunnah. Dissertation. Current position.
Anneke ter Schure. 2021. Dung, Dirt & DNA: unearthing past and present biodiversity using environmental DNA metabarcoding. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Biosciences, the Faculty of Mathematics and Natural Sciences, University of Oslo. Main supervisor: Sanne Boessenkool; Co-supervisors Hugo de Boer, Anne Brysting. Dissertation. Current position.
Marcel Polling. 2021. The hidden biodiversity of pollen. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Research and Collections, Natural History Museum, University of Oslo. Main supervisor: Hugo de Boer; Co-supervisors Barbara Gravendeel, Fons Verbeek. Defense. Current position.
Nurya Abdurhman Birhanu. 2020. Plant diversity, ethnobotany and barcoding of medicinal and cosmetic plants in Kalu and Bati Districts of Amhara Region, Ethiopia. Dissertation for the Degree of Doctor of Philosophy. Department of Plant Biology and Biodiversity Management, Addis Ababa University, Addis Ababa, Ethiopia. Main supervisor Zemede Asfaw; Co-supervisors Hugo de Boer, Sebsebe Demissew. Current position.
Seethapathy Gopalakrishnan Saroja. 2019. Ethnobotany, phytochemistry and DNA metabarcoding studies on Indian traditional medicine. Dissertation for the degree of Philoshiae Doctor (PhD). Section for Pharmaceutical Chemistry, Department of Pharmacy & Department of Research and Collections, Natural History Museum, The Faculty of Mathematics and Natural Sciences, University of Oslo. Dissertation. Current position.
Vincent Manzanilla. 2018. Raising the bar - Molecular identification of plants. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Research and Collections, Natural History Museum, University of Oslo. Main supervisor Anneleen Kool; Co-supervisors Hugo de Boer, Gary Martin. Dissertation. Current position.
Sarina Veldman. 2018. Markets, mixtures and molecular methods: Investigating medicinal plant and edible orchid diversity in Tanzania and Zambia. Uppsala University, Disciplinary Domain of Science and Technology, Biology, Department of Organismal Biology. Main supervisor Hugo de Boer; Co-supervisors Barbara Gravendeel, Tinde van Andel, Joseph Otieno. Dissertation. Current position.
Ancuta-Cristina Raclariu. 2017. Molecular authentication of complex herbal products for quality and safety. Dissertation for the degree of Philoshiae Doctor (PhD). Department of Research and Collections, Natural History Museum, University of Oslo. Main supervisor Hugo de Boer; Co-supervisors Cristi Ichim, Anne Brysting. Defense. Current position.