Magnus Popp
Background
MSc in Botany (1999), University of Gothenburg.
PhD in Systematic Botany (2004), Uppsala University.
Teaching and tutoring
Leader of the Research School in Biosystematics – ForBio.
Special fields
My general research interests are phylogenetic reconstruction, biogeography and phylogeography. I'm particularly interested in the different aspects of genomic and transcriptomic evolution and phylogenetic reconstruction of polyploid plants.
Current research focus on developing lab protocols and analysis pipelines for utilizing next generation sequencing platforms to address phylogenetic, bio- and phylogeographic questions in di- and polyploid non-model plant groups. I am also trying to reconstruct the Holocene vegetation history from DNA in high-altitude volcanic lake sediments from East Africa. Analogous to poking an open wound, I'm doing some fossil calibrated molecular dating studies too.
Ongoing research projects
Searching for the roots of the arctic flora: biogeographic connections to the Himalayas
Publications
Piñeiro, R., Popp, M., Hassel, K., Listl, D., Westergaard, KB., Flatberg, KI., Stenøien, H.K., and Brochmann, C. 2012. Circumarctic dispersal and long-distance colonization of South America: the moss genus Cinclidium. Journal of Biogeography, 39: 2041-2051.
Popp, M., Mirré, V., and Brochmann, C. 2011. A single mid-Pleistocene long-distance dispersal by a bird can explain the extreme bipolar disjunction in crowberries (Empetrum). Proceedings of the National Academy of Sciences of the United States of America, 108(16): 6520-6525.
Westergaard, K. B., I. G. Alsos, Popp, M., Engelskjøn, T., Flatberg, K. I., and Brochmann, C. 2011. Glacial survival may matter after all: nunatak signatures in the rare European populations of two west-arctic species. Molecular Ecology, 20(2): 376-393.
Désamoré, A., Laenen, B., Devos, N., Popp, M., González-Mancebo, J.M., Carine, M.A., and Vanderpoorten, A. 2011. The origins of laurisilva diversity: insights from the phylogeography of Erica arborea. Journal of Biogeography, 38(1): 164-176.
Gussarova, G., Popp, M., Vitek, E., and Brochmann, C. 2008. Molecular phylogeny and biogeography of the bipolar Euphrasia (Orobanchaceae): recent radiations in an old genus. Molecular Phylogenetics and Evolution, 48(2): 444-460.
Popp, M., Gizaw, A., Nemomissa, S., Suda, J., and Brochmann, C. 2008. Colonization and diversification in the African “sky islands” by Eurasian Lychnis L. (Caryophyllaceae). Journal of Biogeography, 35(6): 1016-1029.
Popp, M. New combinations in Lychnis L. (Caryophyllaceae) from Africa. Novon, 18: 99-100, 2008.
Eidesen, P. B., Alsos, I. G., Popp, M., Stensrud, Ø., Suda, J., and Brochmann, C. 2007. Nuclear vs. plastid data: complex Pleistocene history of a circumpolar key species. Molecular Ecology, 16: 3902-3925.
Popp, M. and Oxelman, B. 2007. Origin and evolution of North American polyploid Silene (Caryophyllaceae). American Journal of Botany 94: 330-349.
Eggens, F., Popp, M., Nepokroeff, M., Wagner, W. L., and Oxelman, B. 2007. The origin and number of introductions of the Hawaiian endemic Silene species (Caryophyllaceae). American Journal of Botany 94: 210-218.
Schönswetter, P., Suda, J., Popp, M., Weiss-Schneeweiss, H., and Brochmann, C. 2007. Circumpolar phylogeography of Juncus biglumis (Juncaceae) inferred from AFLP fingerprints, cpDNA sequences, nuclear DNA content and chromosome numbers. Molecular Phylogenetics and Evolution 42: 92-103.
Schönswetter, P., Popp, M., and Brochmann, C. 2006. Rare arctic-alpine plants of the European Alps have different immigration histories: the snowbed species Minuartia biflora and Ranunculus pygmaeus. Molecular Ecology 15(3): 709-720.
Schönswetter, P., Popp, M., and Brochmann, C. 2006. Central Asian origin of and strong genetic differentiation among populations of the rare and disjunct Carex atrofusca (Cyperaceae) in the Alps. Journal of Biogeography 33(5): 948-956.
Popp, M., Erixon, P., Eggens, F., and Oxelman, B. 2005. Origin and evolution of a circumpolar polyploid species complex in Silene (Caryophyllaceae) inferred from low copy nuclear RNA polymerase introns, rDNA, and chloroplast DNA. Systematic Botany 30(2): 302-313.
Popp, M. and Oxelman, B. 2004. Evolution of a RNA Polymerase gene family in Silene (Caryophyllaceae) – Incomplete concerted evolution and topological congruence among paralogues. Systematic Biology 53(6): 914-932.
Grundt, H. H., Popp, M., Brochmann, C., and Oxelman, B. 2004. Polyploid origins in a circumpolar complex in Draba (Brassicaceae) inferred from cloned nuclear DNA sequences and fingerprints. Molecular Phylogenetics and Evolution 32: 695-710.
Popp, M. and Oxelman, B. 2001 Inferring the history of the polyploid Silene aegaea (Caryophyllaceae) using plastid and homoeologous nuclear DNA sequences. Molecular Phylogenetics and Evolution 20: 474-481.
Oxelman, B., Lidén, M., Rabeler, R. K., and Popp, M. 2000. A revised generic classification of the tribe Sileneae (Caryophyllaceae ). Nordic Journal of Botany 20: 743-748.
Eriksen, B. and Popp, M. 2000. Pollen tube growth in naturally and artificially pollinated flowers of two species of Potentilla in northern Swedish Lapland. - Det Norske Videnskaps-Akademi. I. Matematisk Naturvitenskapelig Klasse, Skrifter, Ny Serie 39: 55-65.
- Pineiro, Rosalia; Popp, Magnus; Hassel, Kristian; Listl, Daniela; Westergaard, Kristine; Flatberg, Kjell Ivar; Stenøien, Hans K. & Brochmann, Christian (2012). Circumarctic dispersal and long-distance colonization of South America: the moss genus Cinclidium. Journal of Biogeography. ISSN 0305-0270. 39(11), s 2041- 2051 . doi: 10.1111/j.1365-2699.2012.02765.x
- Désamoré, Aurélie; Laenen, Benjamin; Devos, Nicolas; Popp, Magnus; González-Mancebo, Juana Maria; Carine, Mark A. & Vanderpoorten, Alain (2011). Out of Africa: north-westwards Pleistocene expansions of the heather Erica arborea. Journal of Biogeography. ISSN 0305-0270. 38(1), s 164- 176 . doi: 10.1111/j.1365-2699.2010.02387.x
- Popp, Magnus; Mirre, Virginia & Brochmann, Christian (2011). A single Mid-Pleistocene long-distance dispersal by a bird can explain the extreme bipolar disjunction in crowberries (Empetrum). Proceedings of the National Academy of Science of the United States of America. ISSN 0027-8424. 108(16), s 6520- 6525 . doi: 10.1073/pnas.1012249108
- Westergaard, Kristine; Alsos, Inger Greve; Popp, Magnus; Engelskjøn, Torstein; Flatberg, Kjell Ivar & Brochmann, Christian (2011). Glacial survival may matter after all: nunatak signatures in the rare European populations of two west-arctic species. Molecular Ecology. ISSN 0962-1083. 20(2), s 376- 393 . doi: 10.1111/j.1365-294X.2010.04928.x
- Gusarova, Galina; Popp, Magnus; Vitek, E & Brochmann, Christian (2008). Molecular phylogeny and biogeography of the bipolar Euphrasia (Orobanchaceae): Recent radiations in an old genus. Molecular Phylogenetics and Evolution. ISSN 1055-7903. 48, s 444- 460
- Popp, Magnus (2008). New combinations in Lychnis (Caryophyllaceae) from Africa. Novon. ISSN 1055-3177. 18 . doi: 10.3417/2006120
- Popp, Magnus; Gizaw, Abel; Nemomissa, Sileshi; Suda, J & Brochmann, Christian (2008). Colonization and diversification in the African 'sky islands' by Eurasian Lychnis L. (Caryophyllaceae). Journal of Biogeography. ISSN 0305-0270. 35, s 1016- 1029 . doi: 10.1111/j.1365-2699.2008.01902.x
- Eggens, F; Popp, Magnus; Nepokroeff, M; Wagner, WL & Oxelman, B (2007). The origin and number of introductions of the Hawaiian endemic Silene species (Caryophyllaceae). American Journal of Botany. ISSN 0002-9122. 94
- Eidesen, Pernille Bronken; Alsos, Inger Greve; Popp, Magnus; Stensrud, Øyvind; Suda, Jan & Brochmann, Christian (2007). Nuclear vs. plastid data: complex Pleistocene history of a circumpolar key species. Molecular Ecology. ISSN 0962-1083. 16, s 3902- 3925 . doi: 10.1111/j.1365-294X.2007.03425.x
- Popp, Magnus & Oxelman, B (2007). Origin and evolution of North American polyploid Silene (Caryophyllaceae). American Journal of Botany. ISSN 0002-9122. 94
- Schonswetter, Peter; Suda, J; Popp, Magnus; Weiss-Schneeweiss, H & Brochmann, Christian (2007). Circumpolar phylogeography of Juncus biglumis (Juncaceae) inferred from AFLP fingerprints, cpDNA sequences, nuclear DNA content and chromosome numbers. Molecular Phylogenetics and Evolution. ISSN 1055-7903. 42, s 92- 103 . doi: 10.1016/j.ympev.2006.06.016
- Schonswetter, P; Popp, Magnus & Brochmann, Christian (2006). Rare arctic-alpine plants of the European Alps have different immigration histories: the snow bed species Minuartia biflora and Ranunculus pygmaeus. Molecular Ecology. ISSN 0962-1083. 15
- Schonswetter, P; Popp, Magnus & Brochmann, Christian (2006). Central Asian origin of and strong genetic differentiation among populations of the rare and disjunct Carex atrofusca (Cyperaceae) in the Alps. Journal of Biogeography. ISSN 0305-0270. 33
- Grundt, Hanne Hegre; Popp, Magnus; Brochmann, Christian & Oxelman, Bengt (2004). Polyploid origins in a circumpolar complex in Draba (Brassicaceae) inferred from cloned nuclear DNA sequences and fingerprints.. Molecular Phylogenetics and Evolution. ISSN 1055-7903. 32, s 695- 710
- Popp, Magnus (2011). Presentation of the Research school in biosystematcis - ForBio.
- Popp, Magnus (2011). Studium av slektskap og grupper av organismer.
- Popp, Magnus & Elvinger, Nora (2011). 454 amplicon sequencing applied to polyploid plants.
- Abdikaman, Ahmed; Brochmann, Christian; Mwachala, Geoffrey; Newton, E; Nemomissa, Sileshi; Popp, Magnus; Mirre, Virginia & Linder, Peter (2010). The morphological variation and distribution of the genus Pentaschistis (Poaceae) in the alpine zones of East African and Ethiopian mountains.
- Gizaw, Abel; Kebede, Mulugeta; Nemomissa, Sileshi; Ehrich, Dorothee; Bekele, Biructawit; Mirre, Virginia; Brochmann, Christian & Popp, Magnus (2010). Phylogeography of Erica arborea and E. trimera in the afro-alpine region based on AFLPs and chloroplast DNA sequence variation.
- Masao, Catherine; Munishi, Pantaleo; Popp, Magnus; Mirre, Virginia; Knox, Eric; Nemomissa, Sileshi & Brochmann, Christian (2010). Genetic diversity, evolutionary history and conservation of the giant lobelias in Eastern Africa.
- Mugizi, Felly; Nemomissa, Sileshi; Eilu, Gerald; Mirre, Virginia; Popp, Magnus; Knox, Eric & Brochmann, Christian (2010). Evolutionary history and genetic diversity of the giant senecios in the East African Mountains.
- Nemomissa, Sileshi; Popp, Magnus; Abdikaman, Ahmed; Gizaw, Abel; Masao, Catherine; Mugizi, Felly; Wondimu, Tigist; Pimentel, Manuel; Kebede, Mulugeta; Mirre, Virginia; Linder, Peter; Suda, Jan; Knox, Eric; Eilu, Gerald; Munishi, Pantaleo; Muwanika, Vincent; Mwachala, Geoffrey; Taberlet, Pierre & Brochmann, Christian (2010). The AFROALP-II project – Afro-alpine 'sky islands': genetic versus taxonomic biodiversity, climate change and conservation.
- Pimentel, Manuel; Popp, Magnus; Mirre, Virginia; Sahuquillo, Elvira; Nemomissa, Sileshi & Brochmann, Christian (2010). Evolution and biogeography of a temperate grass genus: the sweet vernal grasses (Anthoxanthum s.l., Poaceae-Pooideae).
- Piñeiro, Rosalia; Popp, Magnus; Nemomissa, Sileshi; Gizaw, Abel; Masao, Catherine; Mugizi, Felly; Wondimu, Tigist; Pimentel, Manuel; Mirre, Virginia; Linder, Peter; Eilu, Gerald; Munishi, Pantaleo; Mwachala, Geoffrey; Taberlet, Pierre & Brochmann, Christian (2010). Which factors influence genetic diversity in the Afro-alpine ecosystem in eastern Africa?.
- Popp, Magnus (2010). Presentation av Norsk-svensk forskarskola i biosystematik, ForBio.
- Popp, Magnus; Boessenkool, Sanne; McGlynn, Gayle; Taylor, David & Brochmann, Christian (2010). Reconstructing Afro-alpine plant community history using ancient DNA from East African volcanic lake sediment cores.
- Popp, Magnus & Todt, Christiane (2010). Undervisning inom biosystematik i Norge och Sverige – en kursöversikt.
- Wondimu, Tigist; Brochmann, Christian; Popp, Magnus; Kebede, Mulugeta; Mirre, Virginia; Suda, Jan & Nemomissa, Sileshi (2010). Phylogeny and biogeography of African Swertia L.
- Westergaard, Kristine Bakke; Alsos, Inger Greve; Popp, Magnus; Engelskjøn, Torstein; Flatberg, Kjell Ivar & Brochmann, Christian (2009). Genetic diversity and differentiation in the rare arctic-alpine plants Arenaria humifusa and Sagina caespitosa.
- Westergaard, Kristine; Alsos, Inger Greve; Popp, Magnus; Engelskjøn, Torstein; Flatberg, Kjell Ivar & Brochmann, Christian (2009). Genetic diversity and differentiation in the rare arctic-alpine plants Arenaria humifusa and Sagina caespitosa..
- Popp, Magnus (2009). Afro-alpine 'sky islands': genetic versus taxonomic biodiversity, climate change, and conservation.
- Popp, Magnus (2009). Using AFLP, plastid and nuclear low-copy DNA regions to infer the history of Empetrum L (Ericaceae).
- Popp, Magnus; Mirre, Virginia; Elven, Reidar; Suda, Jan & Brochmann, Christian (2009). Släktskap och datering av evolutionära händelser inom det bipolära släktet Empetrum L. (Ericaceae) baserat på plastid-DNA och nukleära lågkopiegener.
- Popp, Magnus; Ehrich, Dorothee; Kebede, Mulugeta; Assefa, Adane Terefe; Gizaw, Abel; Bekele, Biructawit; Kvernstuen, Liv Guro; Mirre, Virginia; Taberlet, Pierre; Nemomissa, Sileshi & Brochmann, Christian (2008). Comparative phylogeography of afro-alpine plants inferred from AFLP and plastid DNA variation.
- Westergaard, Kristine; Popp, Magnus; Ehrich, Dorothee; Flatberg, Kjell Ivar; Alsos, Inger Greve; Engelskjøn, Torstein & Brochmann, Christian (2008). Did vascular plants and bryophytes survive the last glaciation in Scandinavia?.
- Westergaard, Kristine Bakke; Popp, Magnus; Flatberg, Kjell Ivar; Alsos, Inger Greve; Engelskjøn, Torstein & Brochmann, Christian (2008). Did vascular plants and bryophytes survive the last glaciation in Scandinavia?.
- Westergaard, Kristine; Popp, Magnus; Flatberg, Kjell Ivar & Brochmann, Christian (2007). Did vascular plants and bryophytes survive the last ice age in Scandinavia?.
- Gizaw, Abel; Bekele, Biructawit; Ehrich, Dorothee; Popp, Magnus; Nemomissa, Sileshi & Brochmann, Christian (2007). Comparative phylogeography of afro-alpine plants inferred from cpDNA variation.
- Gusarova, Galina; Popp, Magnus; Vitek, E & Brochmann, Christian (2007). Molecular phylogeny and biogeography of Euphrasia (Orobanchaceae)..
- Mirre, Virginia; Popp, Magnus; Suda, Jan; Elven, Reidar & Brochmann, Christian (2007). Släktskap inom det bipolära släktet Empetrum L. (Ericaceae) baserat på plastid-DNA och nukleära lågkopiegener..
- Mirre, Virginia; Popp, Magnus; Suda, Jan; Elven, Reidar & Brochmann, Christian (2007). The history of the bipolar genus Empetrum L. (Ericaceae) inferred from plastid and nuclear low copy DNA.
- Popp, Magnus; Gizaw, Abel; Nemomissa, Sileshi; Suda, Jan & Brochmann, Christian (2007). Colonization and diversification in the afro-alpine “sky islands” by Eurasian Lychnis L. (Caryophyllaceae)..
- Popp, Magnus; Nemomissa, Sileshi & Brochmann, Christian (2007). Afro-alpina “himmelsöar” - genetisk kontra taxonomisk biodiversitet, klimatförändring och bevarandestrategier.
- Popp, Magnus; Gizaw, Abel; Nemomissa, Sileshi & Brochmann, Christian (2005). Biogeography of the afroalpine genus Uebelinia Hochst. (Caryophyllaceae) inferred from chloroplast and low-copy nuclear DNA sequences.
- Schönswetter, Peter; Popp, Magnus & Brochmann, Christian (2005). Immigration history of rare arctic-alpine plants into the Alps.
- Schönswetter, Peter; Popp, Magnus & Brochmann, Christian (2005). Immigration history of rare arctic-alpine plants into the Alps.
- Grundt, Hanne Hegre; Popp, M.; Borgen, Liv; Elven, Reidar; Brochmann, Christian & Oxelman, B. (2002). The history of the circumpolar allopolyploid Draba lactea based on homoeologous nuclear DNA sequences.